STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_2438Diacylglycerol kinase catalytic domain protein. (352 aa)    
Predicted Functional Partners:
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 
  
 0.869
acoA
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 
  
 0.869
acoB
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta.
 
  
 0.837
nadE-2
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.615
bkdA2
2-oxoisovalerate dehydrogenase subunit beta.
 
  
 0.520
DM40_1862
Hypothetical protein.
     
  0.499
acpA
acid_phos_Burk: acid phosphatase, Burkholderia-type family protein.
     
  0.499
DM40_3315
yjdL_sub1_fam: amino acid/peptide transporter family protein.
     
  0.499
acpA-2
acid_phos_Burk: acid phosphatase, Burkholderia-type family protein.
     
  0.499
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
     0.457
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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