STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_2610Amidohydrolase family protein. (470 aa)    
Predicted Functional Partners:
DM40_5295
[2Fe-2S] binding domain protein.
 
 
 0.691
DM40_5427
pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein.
  
 
 0.667
uraH
Hdxy_isourate: hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.647
xdhB
xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit.
 
 
 0.639
DM40_5294
FAD binding domain in molybdopterin dehydrogenase family protein.
 
 
  0.625
xdhA
xanthine_xdhA: xanthine dehydrogenase, small subunit.
 
  
  0.594
uraD
UHCUDC: OHCU decarboxylase.
 
     0.508
DM40_1296
Phosphoribosyl transferase domain protein.
 
  
 0.501
hutI
hutI: imidazolonepropionase.
  
 
 0.488
hutG
hutG_amidohyd: N-formylglutamate deformylase.
  
 
 0.474
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.