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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_2743Bacterial transferase hexapeptide family protein. (174 aa)    
Predicted Functional Partners:
can
Carbonic anhydrase 2; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.918
DM40_527
Carbonic anhydrase family protein.
    
 0.918
DM40_4897
Carbonic anhydrase family protein.
    
 0.916
DM40_2744
Hsp33 family protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
       0.726
DM40_2742
Hypothetical protein.
       0.563
DM40_3755
wecB: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
  0.552
hydA
D-hydantoinase: dihydropyrimidinase.
  
    0.546
DM40_2456
Beta-eliminating lyase family protein; Belongs to the DegT/DnrJ/EryC1 family.
    
 0.511
wecE
ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase family protein; Belongs to the DegT/DnrJ/EryC1 family.
    
 0.511
DM40_2745
Hypothetical protein.
       0.494
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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