STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_27704Fe-4S binding domain protein. (470 aa)    
Predicted Functional Partners:
DM40_2771
Cysteine-rich domain protein.
 0.997
DM40_1764
Hypothetical protein.
 
 
 0.980
DM40_5344
Cysteine-rich domain protein.
 0.969
DM40_5346
Hypothetical protein.
 
 
 0.959
DM40_5626
Hypothetical protein; FAD linked oxidase, C-terminal domain protein.
 
 0.857
DM40_352
Hypothetical protein; FAD linked oxidase, C-terminal domain protein.
  
 0.837
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.807
glcF
4Fe-4S dicluster domain protein.
 
 0.801
DM40_3831
4Fe-4S dicluster domain protein.
 
 0.765
DM40_1030
Malic enzyme, NAD binding domain protein; Belongs to the malic enzymes family.
  
 
 0.749
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.