STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
DM40_2809Glutamine synthetase, catalytic domain protein. (445 aa)    
Predicted Functional Partners:
DM40_1121
Glutamine amidotransferases class-II family protein.
  
 
 0.966
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.938
carB
CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit.
  
 0.927
DM40_2810
Peptidase C26 family protein.
 
  
 0.925
nit4
Bifunctional nitrilase/nitrile hydratase NIT4.
    
 0.924
DM40_4656
Bacterial NAD-glutamate dehydrogenase family protein.
     
 0.917
carA
CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
 
 0.915
gltD
Glutamate synthase, NADH/NADPH, small subunit domain protein.
  
 
 0.914
DM40_1366
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.914
glsA
Gln_ase: glutaminase A; Belongs to the glutaminase family.
    
 0.913
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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