STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_2880maoC like domain protein. (153 aa)    
Predicted Functional Partners:
DM40_2881
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
  0.844
DM40_2882
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
  0.832
DM40_2879
maoC like domain protein.
     
 0.816
DM40_2506
enoyl-CoA hydratase/isomerase family protein.
 
 0.721
DM40_481
enoyl-CoA hydratase/isomerase family protein.
 
 0.713
DM40_337
enoyl-CoA hydratase/isomerase family protein.
  
 0.673
DM40_5551
Monoamine oxidase regulatory protein, putative.
  
     0.664
uca
Urea_carbox: urea carboxylase.
    
 0.609
katE
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  0.595
catA-3
Catechol 1,2-dioxygenase; Belongs to the catalase family.
   
  0.581
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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