Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_1584 | DM40_2142 | DM40_1584 | DM40_2142 | Hypothetical protein. | Putative transmembrane protein. | 0.595 |
DM40_1584 | DM40_2143 | DM40_1584 | DM40_2143 | Hypothetical protein. | Putative transmembrane protein. | 0.621 |
DM40_1584 | DM40_2395 | DM40_1584 | DM40_2395 | Hypothetical protein. | Hypothetical protein. | 0.773 |
DM40_1584 | DM40_3029 | DM40_1584 | DM40_3029 | Hypothetical protein. | ompW family protein. | 0.619 |
DM40_1584 | DM40_3702 | DM40_1584 | DM40_3702 | Hypothetical protein. | Putative transmembrane protein. | 0.616 |
DM40_1584 | DM40_5620 | DM40_1584 | DM40_5620 | Hypothetical protein. | Putative transmembrane protein. | 0.660 |
DM40_1584 | DM40_875 | DM40_1584 | DM40_875 | Hypothetical protein. | ATP synthase I chain family protein. | 0.773 |
DM40_2142 | DM40_1584 | DM40_2142 | DM40_1584 | Putative transmembrane protein. | Hypothetical protein. | 0.595 |
DM40_2142 | DM40_2143 | DM40_2142 | DM40_2143 | Putative transmembrane protein. | Putative transmembrane protein. | 0.697 |
DM40_2142 | DM40_2395 | DM40_2142 | DM40_2395 | Putative transmembrane protein. | Hypothetical protein. | 0.720 |
DM40_2142 | DM40_3029 | DM40_2142 | DM40_3029 | Putative transmembrane protein. | ompW family protein. | 0.667 |
DM40_2142 | DM40_3599 | DM40_2142 | DM40_3599 | Putative transmembrane protein. | Hypothetical protein. | 0.685 |
DM40_2142 | DM40_875 | DM40_2142 | DM40_875 | Putative transmembrane protein. | ATP synthase I chain family protein. | 0.644 |
DM40_2143 | DM40_1584 | DM40_2143 | DM40_1584 | Putative transmembrane protein. | Hypothetical protein. | 0.621 |
DM40_2143 | DM40_2142 | DM40_2143 | DM40_2142 | Putative transmembrane protein. | Putative transmembrane protein. | 0.697 |
DM40_2143 | DM40_2395 | DM40_2143 | DM40_2395 | Putative transmembrane protein. | Hypothetical protein. | 0.712 |
DM40_2143 | DM40_3029 | DM40_2143 | DM40_3029 | Putative transmembrane protein. | ompW family protein. | 0.623 |
DM40_2143 | DM40_3599 | DM40_2143 | DM40_3599 | Putative transmembrane protein. | Hypothetical protein. | 0.672 |
DM40_2143 | DM40_875 | DM40_2143 | DM40_875 | Putative transmembrane protein. | ATP synthase I chain family protein. | 0.662 |
DM40_2395 | DM40_1584 | DM40_2395 | DM40_1584 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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