Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Hgd_33-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein. (296 aa)    
Predicted Functional Partners:
DM40_3060
Hypothetical protein.
 
  
 0.948
DM40_3061
Hypothetical protein; Class II Aldolase and Adducin N-terminal domain protein.
 
  
 0.927
DM40_3064
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
 
   
 0.716
fba
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
  
 0.675
DM40_3058
Bacterial regulatory s, gntR family protein.
 
     0.640
DM40_3063
Xylose isomerase-like TIM barrel family protein; Belongs to the hyi family.
 
  
 0.615
DM40_2190
enoyl-CoA hydratase/isomerase family protein.
 
 
 
  0.588
mmsA-2
MMSDH: methylmalonate-semialdehyde dehydrogenase.
  
 
  0.579
mmsA-4
MMSDH: methylmalonate-semialdehyde dehydrogenase.
  
 
  0.579
mmsA
MMSDH: methylmalonate-semialdehyde dehydrogenase.
   
 
  0.519
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.