STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dkgBAldo/keto reductase family protein. (268 aa)    
Predicted Functional Partners:
DM40_2247
Hypothetical protein; prkA serine kinase C-terminal domain protein.
   
    0.800
DM40_3214
Oxidoreductase, FMN-binding protein.
  
  
 0.609
otsB
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
   0.604
DM40_5725
Aldo/keto reductase family protein.
 
 
0.598
DM40_3210
Major Facilitator Superfamily protein.
 
     0.573
DM40_2223
Aldo/keto reductase family protein.
 
 
0.572
DM40_3439
Aldo/keto reductase family protein.
 
 
0.569
DM40_3212
Luciferase-type oxidoreductase, BA3436 family protein; lucif_BA3436: luciferase-type oxidoreductase, BA3436 family protein.
 
     0.539
DM40_70
Copper/zinc superoxide dismutase family protein.
   
  
 0.535
DM40_3820
Zinc-binding dehydrogenase family protein.
   
 
 0.532
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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