STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_3214Oxidoreductase, FMN-binding protein. (372 aa)    
Predicted Functional Partners:
morB
Morphinone reductase.
  
  
 
0.908
DM40_5060
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
  
 
0.907
nfnB
Oxygen-insensitive NAD(P)H nitroreductase.
  
 
 0.901
dkgB
Aldo/keto reductase family protein.
  
  
 0.609
gor
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
   
  
 0.503
DM40_1723
Electron transfer flavodomain protein.
  
 
 0.474
DM40_3005
Electron transfer flavodomain protein.
  
 
 0.474
DM40_5522
Electron transfer flavodomain protein.
  
 
 0.474
ahpD
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
      
 0.441
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.