STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_3258Hypothetical protein; Glutathione S-transferase, N-terminal domain protein. (219 aa)    
Predicted Functional Partners:
DM40_1272
ahpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 
  0.945
gshB
Glut_syn: glutathione synthase; Belongs to the prokaryotic GSH synthase family.
 
  
 0.924
gor
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
     
 0.920
DM40_542
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
 
  
 0.821
DM40_3243
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
  
  
  0.807
DM40_2671
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
   
 
 0.802
DM40_1392
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
  
  
 
0.765
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.736
DM40_2876
Glutathione S-transferase.
  
  
 0.720
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.693
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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