Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acyPAcylphosphatase. (98 aa)    
Predicted Functional Partners:
DM40_4417
Phosphate acetyl/butaryl transferase family protein.
    
 0.919
ackA
ackA: acetate kinase.
     
 0.919
DM40_3550
Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family.
     
 0.902
DM40_3628
Amidase family protein; Belongs to the amidase family.
    
  0.902
DM40_4662
Amidase family protein; Belongs to the amidase family.
    
  0.902
DM40_5120
Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family.
     
 0.902
DM40_5601
Amidase family protein.
    
  0.902
DM40_980
Amidase family protein; Belongs to the amidase family.
    
  0.902
nit4
Bifunctional nitrilase/nitrile hydratase NIT4.
     
  0.900
DM40_1974
AMP-binding enzyme family protein.
     
 0.900
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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