STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcPutative acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (246 aa)    
Predicted Functional Partners:
DM40_3427
PHB_DH: 3-hydroxybutyrate dehydrogenase family protein.
 
  
  0.958
DM40_2857
PHB_DH: 3-hydroxybutyrate dehydrogenase family protein.
 
  
  0.895
DM40_3426
Patatin-like phospholipase family protein.
 
   
 0.839
DM40_2094
pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit.
    
 0.835
DM40_2095
pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit.
    
 0.816
DM40_559
HMGL-like family protein.
  
  
  0.807
DM40_4721
Patatin-like phospholipase family protein.
 
   
 0.697
pcaI
3-oxoadipate CoA-transferase subunit A.
    
 0.593
pcaJ
3-oxoadipate CoA-transferase subunit B.
    
 0.573
mdcA
mdcA: malonate decarboxylase, alpha subunit.
     
 0.477
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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