Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcaCdecarb_PcaC: 4-carboxymuconolactone decarboxylase. (128 aa)    
Predicted Functional Partners:
pcaD
protocat_pcaD: 3-oxoadipate enol-lactonase.
 
 0.998
pcaB
protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.994
catC
Muco_delta: muconolactone delta-isomerase.
  
 
 0.915
catC-2
Muco_delta: muconolactone delta-isomerase.
  
 
 0.915
DM40_5389
Alpha/beta hydrolase fold family protein.
  
 
 0.909
pcaH
Protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit.
 
  
 0.845
pobA
Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase.
 
   
 0.835
pcaG
Protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit.
 
  
 0.831
pcaJ
3-oxoadipate CoA-transferase subunit B.
  
  
 0.595
pcaI
3-oxoadipate CoA-transferase subunit A.
  
  
 0.570
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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