Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM40_1031 | DM40_4283 | DM40_1031 | DM40_4283 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | Rhodanese-like domain protein. | 0.547 |
| DM40_1031 | DM40_540 | DM40_1031 | DM40_540 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 0.975 |
| DM40_1031 | acdS | DM40_1031 | DM40_3548 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. | 0.546 |
| DM40_1031 | metC | DM40_1031 | DM40_2381 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | cysta_beta_ly_B: cystathionine beta-lyase. | 0.555 |
| DM40_1031 | metC-2 | DM40_1031 | DM40_4841 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | cysta_beta_ly_B: cystathionine beta-lyase. | 0.555 |
| DM40_3524 | acdS | DM40_3524 | DM40_3548 | Beta-eliminating lyase family protein. | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. | 0.573 |
| DM40_3549 | acdS | DM40_3549 | DM40_3548 | asnC-type helix-turn-helix domain protein. | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. | 0.617 |
| DM40_3884 | DM40_4283 | DM40_3884 | DM40_4283 | Rhodanese-like domain protein. | Rhodanese-like domain protein. | 0.552 |
| DM40_3884 | acdS | DM40_3884 | DM40_3548 | Rhodanese-like domain protein. | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. | 0.495 |
| DM40_3884 | metC | DM40_3884 | DM40_2381 | Rhodanese-like domain protein. | cysta_beta_ly_B: cystathionine beta-lyase. | 0.960 |
| DM40_3884 | metC-2 | DM40_3884 | DM40_4841 | Rhodanese-like domain protein. | cysta_beta_ly_B: cystathionine beta-lyase. | 0.639 |
| DM40_4283 | DM40_1031 | DM40_4283 | DM40_1031 | Rhodanese-like domain protein. | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 0.547 |
| DM40_4283 | DM40_3884 | DM40_4283 | DM40_3884 | Rhodanese-like domain protein. | Rhodanese-like domain protein. | 0.552 |
| DM40_4283 | DM40_540 | DM40_4283 | DM40_540 | Rhodanese-like domain protein. | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 0.547 |
| DM40_4283 | acdS | DM40_4283 | DM40_3548 | Rhodanese-like domain protein. | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. | 0.696 |
| DM40_4283 | metC | DM40_4283 | DM40_2381 | Rhodanese-like domain protein. | cysta_beta_ly_B: cystathionine beta-lyase. | 0.703 |
| DM40_4283 | metC-2 | DM40_4283 | DM40_4841 | Rhodanese-like domain protein. | cysta_beta_ly_B: cystathionine beta-lyase. | 0.703 |
| DM40_540 | DM40_1031 | DM40_540 | DM40_1031 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 0.975 |
| DM40_540 | DM40_4283 | DM40_540 | DM40_4283 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | Rhodanese-like domain protein. | 0.547 |
| DM40_540 | acdS | DM40_540 | DM40_3548 | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. | 0.546 |
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