STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_3624Alpha/beta hydrolase fold family protein. (347 aa)    
Predicted Functional Partners:
DM40_3625
Putative cytochrome P460.
 
     0.813
DM40_3623
Alpha/beta hydrolase fold family protein.
 
     0.766
DM40_3627
Serine hydrolase family protein.
 
     0.716
apaH
apaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.685
DM40_5065
nmrA-like family protein.
  
     0.646
DM40_5449
HD domain protein.
  
     0.592
DM40_5846
Putative metal-dependent phosphohydrolase.
  
     0.587
DM40_4729
Periplasmic binding s and sugar binding domain of LacI family protein.
 
      0.565
DM40_1222
HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein.
  
 
 0.550
dehII-2
HAD_type_II: haloacid dehalogenase, type II.
   
 
 0.547
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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