Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_3627Serine hydrolase family protein. (263 aa)    
Predicted Functional Partners:
DM40_3624
Alpha/beta hydrolase fold family protein.
 
     0.716
DM40_3400
Lecithin:cholesterol acyltransferase family protein.
  
     0.706
DM40_3691
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
  
     0.634
DM40_5065
nmrA-like family protein.
  
    0.619
DM40_3628
Amidase family protein; Belongs to the amidase family.
 
     0.616
DM40_3623
Alpha/beta hydrolase fold family protein.
 
     0.609
apaH
apaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.599
DM40_3626
Hypothetical protein.
       0.547
DM40_3625
Putative cytochrome P460.
 
     0.527
DM40_5857
Hypothetical protein.
  
     0.492
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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