Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_3634Sulfatase-modifying factor enzyme 1 family protein. (349 aa)    
Predicted Functional Partners:
atsA
Arylsulfatase.
 
   0.977
DM40_3635
NLPA lipofamily protein.
       0.813
DM40_3636
Putative zinc-/iron-chelating domain protein.
       0.813
betC
Chol_sulfatase: choline-sulfatase.
 
   0.724
DM40_1523
Putative membrane protein.
  
   0.644
egtD
egtD_ergothio: dimethylhistidine N-methyltransferase.
  
  
 0.544
DM40_2276
FAD-NAD(P)-binding family protein.
  
  
 0.442
DM40_2272
Cyc_pep_trnsptr: cyclic peptide transporter family protein.
  
  
 0.436
DM40_3166
Aldehyde dehydrogenase family protein.
  
     0.436
DM40_4176
Aldehyde dehydrogenase family protein.
  
     0.433
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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