Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_3815Polysaccharide biosynthesis family protein. (488 aa)    
Predicted Functional Partners:
DM40_3814
NDP-sugDHase: nucleotide sugar dehydrogenase family protein.
  
  
 0.901
DM40_3806
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.899
DM40_4242
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.840
DM40_3809
Eps_fam: capsular exopolysaccharide family domain protein.
 
  
 0.838
DM40_3835
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.833
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.831
rfbB
dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.829
DM40_3810
Glycosyl transferases group 1 family protein.
  
  
 0.824
DM40_3813
Glycosyl transferases group 1 family protein.
  
  
 0.824
DM40_3811
Glycosyl transferases group 1 family protein.
  
  
 0.822
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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