Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
DM40_3830Rubrerythrin family protein. (140 aa)    
Predicted Functional Partners:
DM40_3831
4Fe-4S dicluster domain protein.
 
   
 0.894
DM40_3832
Hypothetical protein.
 
   
 0.878
DM40_1133
Mce related family protein.
      
 0.604
fur
Ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.552
fur-2
Ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.515
ahpC_1
Redoxin family protein.
  
  
 0.500
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.500
tsaA
Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein.
  
  
 0.493
DM40_297
Hypothetical protein.
  
  
 0.489
DM40_3828
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
       0.450
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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