STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_3912Luciferase-type oxidoreductase, BA3436 family protein; lucif_BA3436: luciferase-type oxidoreductase, BA3436 family protein. (319 aa)    
Predicted Functional Partners:
DM40_3913
Hypothetical protein.
       0.773
msuE
FMN_reduc_MsuE: FMN reductase.
  
 0.625
dltA
D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1.
   
 0.551
DM40_126
2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.546
DM40_5133
2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.546
DM40_5427
pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein.
    
 0.519
DM40_2274
AA-adenyl-dom: amino acid adenylation domain protein.
 
 
 0.514
DM40_4518
FAD binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.503
DM40_4283
Rhodanese-like domain protein.
   
 
  0.497
DM40_3078
NADPH-dependent FMN reductase family protein.
  
  0.484
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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