STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_3948glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein. (129 aa)    
Predicted Functional Partners:
uca
Urea_carbox: urea carboxylase.
  
 
 0.717
DM40_3947
Helix-turn-helix domain protein.
 
     0.608
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 
 
 0.556
DM40_126
2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.544
DM40_5133
2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.544
DM40_3949
Hypothetical protein.
       0.512
DM40_4283
Rhodanese-like domain protein.
   
 
  0.510
ethe1
ETHE1, mitochondrial domain protein.
   
 
 0.504
nuoI
NADH-quinone oxidoreductase, chain I family protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.500
DM40_408
4Fe-4S dicluster domain protein.
  
 
 0.500
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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