Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
DM40_4238Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein. (398 aa)    
Predicted Functional Partners:
DM40_4239
Aminoacyl carrier protein.
 
  
 0.965
DM40_4236
Hypothetical protein.
 
     0.951
DM40_4237
Amino acid--[acyl-carrier-protein] ligase.
 
 
   0.951
DM40_1247
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.950
DM40_2504
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.947
DM40_336
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.947
DM40_337
enoyl-CoA hydratase/isomerase family protein.
  
 0.932
DM40_3095
Carboxyl transferase domain protein.
  
 
 0.925
DM40_4235
Putative beta-mannosidase.
 
     0.925
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.925
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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