Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_126 | DM40_4272 | DM40_126 | DM40_4272 | 2Fe-2S iron-sulfur cluster binding domain protein. | MOSC domain protein. | 0.850 |
DM40_126 | DM40_4518 | DM40_126 | DM40_4518 | 2Fe-2S iron-sulfur cluster binding domain protein. | FAD binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.986 |
DM40_126 | DM40_5022 | DM40_126 | DM40_5022 | 2Fe-2S iron-sulfur cluster binding domain protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.854 |
DM40_126 | DM40_5133 | DM40_126 | DM40_5133 | 2Fe-2S iron-sulfur cluster binding domain protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.764 |
DM40_126 | DM40_5427 | DM40_126 | DM40_5427 | 2Fe-2S iron-sulfur cluster binding domain protein. | pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein. | 0.997 |
DM40_126 | purL | DM40_126 | DM40_2514 | 2Fe-2S iron-sulfur cluster binding domain protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.770 |
DM40_4272 | DM40_126 | DM40_4272 | DM40_126 | MOSC domain protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.850 |
DM40_4272 | DM40_4273 | DM40_4272 | DM40_4273 | MOSC domain protein. | ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein. | 0.500 |
DM40_4272 | DM40_4274 | DM40_4272 | DM40_4274 | MOSC domain protein. | Cytochrome c family protein. | 0.432 |
DM40_4272 | DM40_4381 | DM40_4272 | DM40_4381 | MOSC domain protein. | VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.454 |
DM40_4272 | DM40_4518 | DM40_4272 | DM40_4518 | MOSC domain protein. | FAD binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.721 |
DM40_4272 | DM40_5022 | DM40_4272 | DM40_5022 | MOSC domain protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.811 |
DM40_4272 | DM40_5133 | DM40_4272 | DM40_5133 | MOSC domain protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.850 |
DM40_4272 | DM40_5427 | DM40_4272 | DM40_5427 | MOSC domain protein. | pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein. | 0.587 |
DM40_4272 | pdxH | DM40_4272 | DM40_203 | MOSC domain protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.570 |
DM40_4272 | purL | DM40_4272 | DM40_2514 | MOSC domain protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.436 |
DM40_4273 | DM40_4272 | DM40_4273 | DM40_4272 | ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein. | MOSC domain protein. | 0.500 |
DM40_4273 | DM40_4274 | DM40_4273 | DM40_4274 | ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein. | Cytochrome c family protein. | 0.726 |
DM40_4274 | DM40_4272 | DM40_4274 | DM40_4272 | Cytochrome c family protein. | MOSC domain protein. | 0.432 |
DM40_4274 | DM40_4273 | DM40_4274 | DM40_4273 | Cytochrome c family protein. | ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein. | 0.726 |
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