Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DM40_4278Hypothetical protein; Class II Aldolase and Adducin N-terminal domain protein. (281 aa)    
Predicted Functional Partners:
DM40_4279
Luciferase-like monooxygenase family protein.
 
     0.777
DM40_4277
NMT1-like family protein.
       0.693
DM40_4276
Binding--dependent transport system inner membrane component family protein.
       0.691
DM40_4275
ABC transporter family protein.
       0.689
DM40_3938
hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
   
    0.564
DM40_5518
hpcH/HpaI aldolase/citrate lyase family protein.
   
    0.564
DM40_5531
hpcH/HpaI aldolase/citrate lyase family protein.
   
    0.564
DM40_4274
Cytochrome c family protein.
       0.533
DM40_4273
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
       0.459
DM40_4280
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
  
    0.455
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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