Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_4335Amidohydrolase family protein. (416 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.953
DM40_5427
pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein.
 
 
 0.927
DM40_1532
Phosphoribosyl transferase domain protein.
     
 0.917
DM40_5428
FAD binding domain protein.
  
 
  0.901
ppnP
Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.900
DM40_5535
Hydantoinase/oxoprolinase family protein.
     
  0.900
DM40_5536
Hydantoinase B/oxoprolinase family protein.
     
  0.900
DM40_4334
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
       0.565
DM40_1904
Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family.
  
  
 0.514
DM40_4336
Voltage gated chloride channel family protein.
       0.463
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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