Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_440 | DM40_441 | DM40_440 | DM40_441 | Cytochrome oxidase assembly family protein. | Putative glutathione peroxidase. | 0.966 |
DM40_440 | DM40_442 | DM40_440 | DM40_442 | Cytochrome oxidase assembly family protein. | SURF1 family protein. | 0.993 |
DM40_440 | DM40_446 | DM40_440 | DM40_446 | Cytochrome oxidase assembly family protein. | Cytochrome c oxidase assembly CtaG/Cox11 family protein. | 0.995 |
DM40_440 | DM40_5109 | DM40_440 | DM40_5109 | Cytochrome oxidase assembly family protein. | Cytochrome c oxidase subunit III family protein. | 0.919 |
DM40_440 | coxB | DM40_440 | DM40_449 | Cytochrome oxidase assembly family protein. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.959 |
DM40_440 | coxB-2 | DM40_440 | DM40_5107 | Cytochrome oxidase assembly family protein. | coxB: cytochrome c oxidase, subunit II. | 0.926 |
DM40_440 | coxB-3 | DM40_440 | DM40_5123 | Cytochrome oxidase assembly family protein. | coxB: cytochrome c oxidase, subunit II. | 0.930 |
DM40_440 | ctaD-2 | DM40_440 | DM40_5108 | Cytochrome oxidase assembly family protein. | ctaD_CoxA: cytochrome c oxidase, subunit I. | 0.938 |
DM40_440 | cyoE | DM40_440 | DM40_439 | Cytochrome oxidase assembly family protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
DM40_440 | ftsY | DM40_440 | DM40_411 | Cytochrome oxidase assembly family protein. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.907 |
DM40_441 | DM40_440 | DM40_441 | DM40_440 | Putative glutathione peroxidase. | Cytochrome oxidase assembly family protein. | 0.966 |
DM40_441 | DM40_442 | DM40_441 | DM40_442 | Putative glutathione peroxidase. | SURF1 family protein. | 0.941 |
DM40_441 | DM40_446 | DM40_441 | DM40_446 | Putative glutathione peroxidase. | Cytochrome c oxidase assembly CtaG/Cox11 family protein. | 0.839 |
DM40_441 | DM40_5109 | DM40_441 | DM40_5109 | Putative glutathione peroxidase. | Cytochrome c oxidase subunit III family protein. | 0.663 |
DM40_441 | coxB | DM40_441 | DM40_449 | Putative glutathione peroxidase. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.942 |
DM40_441 | coxB-2 | DM40_441 | DM40_5107 | Putative glutathione peroxidase. | coxB: cytochrome c oxidase, subunit II. | 0.950 |
DM40_441 | coxB-3 | DM40_441 | DM40_5123 | Putative glutathione peroxidase. | coxB: cytochrome c oxidase, subunit II. | 0.951 |
DM40_441 | ctaD-2 | DM40_441 | DM40_5108 | Putative glutathione peroxidase. | ctaD_CoxA: cytochrome c oxidase, subunit I. | 0.591 |
DM40_441 | cyoE | DM40_441 | DM40_439 | Putative glutathione peroxidase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.863 |
DM40_442 | DM40_440 | DM40_442 | DM40_440 | SURF1 family protein. | Cytochrome oxidase assembly family protein. | 0.993 |
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