Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DM40_4439Zeta toxin family protein. (533 aa)    
Predicted Functional Partners:
otsB
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.910
DM40_1932
Phosphoribosyl transferase domain protein.
 
  
 0.843
DM40_1301
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.767
mgtA
ATPase-IIIB_Mg: magnesium-translocating P-type ATPase.
 
    0.688
DM40_223
HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein.
  
    0.653
DM40_305
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein.
  
    0.653
DM40_66
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein.
  
    0.653
DM40_4407
Putative phosphofructokinase pfkB.
 
  
 0.591
DM40_4438
Universal stress family protein.
  
    0.582
mprF
Hypothetical protein.
 
   
 0.551
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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