STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM40_4450Acetyltransferase domain protein. (186 aa)    
Predicted Functional Partners:
DM40_4451
Bacterial extracellular solute-binding s, 3 family protein.
 
  
 0.876
DM40_4455
Bacterial extracellular solute-binding s, 3 family protein.
 
  
 0.824
DM40_4454
HEQRo_perm_3TM: amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
  
 0.677
DM40_4452
Oxido_grp_1: luciferase oxidoreductase, group 1 family protein.
     0.645
DM40_4453
FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein.
 
     0.624
argG
argG: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
  
 0.607
DM40_1121
Glutamine amidotransferases class-II family protein.
     
 0.503
pheA
CM_P2: chorismate mutase.
     
 0.500
DM40_3920
Putative membrane protein.
  
     0.417
DM40_4449
Succinylglutamate desuccinylase / Aspartoacylase family protein.
       0.400
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.