STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amtAmt: ammonium transporter family protein. (502 aa)    
Predicted Functional Partners:
glnB_1
Nitrogen regulatory P-II family protein; Belongs to the P(II) protein family.
 
 0.997
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.995
DM40_1121
Glutamine amidotransferases class-II family protein.
 
  
 0.798
DM40_2788
Sensory box protein.
  
 
 0.686
DM40_2809
Glutamine synthetase, catalytic domain protein.
  
  
 0.577
DM40_4859
Glutamine synthetase, catalytic domain protein.
  
  
 0.577
DM40_590
Glutamine synthetase, catalytic domain protein.
  
  
 0.577
glnD
protein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
 
   
 0.523
glnA
glnA: glutamine synthetase, type I.
  
  
 0.519
aspA
aspA: aspartate ammonia-lyase.
   
  
 0.518
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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