Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_4670Pyridine nucleotide-disulfide oxidoreductase family protein. (414 aa)    
Predicted Functional Partners:
DM40_4682
Rieske [2Fe-2S] domain protein.
 
 
 0.984
fdx
Fdx_isc: ferredoxin, 2Fe-2S type, ISC system.
  
 
 0.917
DM40_4671
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
 
   
 0.882
DM40_4518
FAD binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.813
nirD
nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit.
  
 0.777
DM40_3784
Rieske [2Fe-2S] domain protein.
 
  
 0.764
rubA2
Rubredoxin-2.
  
 
 0.757
DM40_1528
Rubredoxin family protein.
  
 
 0.757
DM40_3124
Hypothetical protein.
  
 
 0.757
fdxH
FDH-beta: formate dehydrogenase, beta subunit.
   
 
 0.756
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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