Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_2685 | DM40_4694 | DM40_2685 | DM40_4694 | Universal stress family protein. | mgtC family protein. | 0.429 |
DM40_2685 | DM40_5267 | DM40_2685 | DM40_5267 | Universal stress family protein. | Universal stress family protein. | 0.745 |
DM40_3443 | DM40_4694 | DM40_3443 | DM40_4694 | Universal stress family protein. | mgtC family protein. | 0.439 |
DM40_4424 | DM40_4694 | DM40_4424 | DM40_4694 | Universal stress family protein. | mgtC family protein. | 0.429 |
DM40_4694 | DM40_2685 | DM40_4694 | DM40_2685 | mgtC family protein. | Universal stress family protein. | 0.429 |
DM40_4694 | DM40_3443 | DM40_4694 | DM40_3443 | mgtC family protein. | Universal stress family protein. | 0.439 |
DM40_4694 | DM40_4424 | DM40_4694 | DM40_4424 | mgtC family protein. | Universal stress family protein. | 0.429 |
DM40_4694 | DM40_4915 | DM40_4694 | DM40_4915 | mgtC family protein. | Putative membrane protein. | 0.592 |
DM40_4694 | DM40_5267 | DM40_4694 | DM40_5267 | mgtC family protein. | Universal stress family protein. | 0.429 |
DM40_4694 | DM40_5289 | DM40_4694 | DM40_5289 | mgtC family protein. | Universal stress family protein. | 0.429 |
DM40_4694 | atpB | DM40_4694 | DM40_876 | mgtC family protein. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.475 |
DM40_4694 | hflB | DM40_4694 | DM40_1950 | mgtC family protein. | ATP-dependent metallopeptidase HflB family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.451 |
DM40_4694 | hflB-2 | DM40_4694 | DM40_4467 | mgtC family protein. | ATP-dependent metallopeptidase HflB family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.451 |
DM40_4694 | mgtA | DM40_4694 | DM40_4570 | mgtC family protein. | ATPase-IIIB_Mg: magnesium-translocating P-type ATPase. | 0.830 |
DM40_4915 | DM40_4694 | DM40_4915 | DM40_4694 | Putative membrane protein. | mgtC family protein. | 0.592 |
DM40_5267 | DM40_2685 | DM40_5267 | DM40_2685 | Universal stress family protein. | Universal stress family protein. | 0.745 |
DM40_5267 | DM40_4694 | DM40_5267 | DM40_4694 | Universal stress family protein. | mgtC family protein. | 0.429 |
DM40_5289 | DM40_4694 | DM40_5289 | DM40_4694 | Universal stress family protein. | mgtC family protein. | 0.429 |
atpB | DM40_4694 | DM40_876 | DM40_4694 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | mgtC family protein. | 0.475 |
atpB | mgtA | DM40_876 | DM40_4570 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATPase-IIIB_Mg: magnesium-translocating P-type ATPase. | 0.544 |
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