Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_1121 | DM40_126 | DM40_1121 | DM40_126 | Glutamine amidotransferases class-II family protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.869 |
DM40_1121 | DM40_4707 | DM40_1121 | DM40_4707 | Glutamine amidotransferases class-II family protein. | Short chain dehydrogenase family protein. | 0.688 |
DM40_1121 | DM40_5133 | DM40_1121 | DM40_5133 | Glutamine amidotransferases class-II family protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.869 |
DM40_1121 | ptsP | DM40_1121 | DM40_424 | Glutamine amidotransferases class-II family protein. | PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family. | 0.430 |
DM40_1121 | uca | DM40_1121 | DM40_5322 | Glutamine amidotransferases class-II family protein. | Urea_carbox: urea carboxylase. | 0.974 |
DM40_126 | DM40_1121 | DM40_126 | DM40_1121 | 2Fe-2S iron-sulfur cluster binding domain protein. | Glutamine amidotransferases class-II family protein. | 0.869 |
DM40_126 | DM40_4707 | DM40_126 | DM40_4707 | 2Fe-2S iron-sulfur cluster binding domain protein. | Short chain dehydrogenase family protein. | 0.611 |
DM40_126 | DM40_5133 | DM40_126 | DM40_5133 | 2Fe-2S iron-sulfur cluster binding domain protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.764 |
DM40_126 | uca | DM40_126 | DM40_5322 | 2Fe-2S iron-sulfur cluster binding domain protein. | Urea_carbox: urea carboxylase. | 0.809 |
DM40_4707 | DM40_1121 | DM40_4707 | DM40_1121 | Short chain dehydrogenase family protein. | Glutamine amidotransferases class-II family protein. | 0.688 |
DM40_4707 | DM40_126 | DM40_4707 | DM40_126 | Short chain dehydrogenase family protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.611 |
DM40_4707 | DM40_4708 | DM40_4707 | DM40_4708 | Short chain dehydrogenase family protein. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.540 |
DM40_4707 | DM40_5133 | DM40_4707 | DM40_5133 | Short chain dehydrogenase family protein. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.611 |
DM40_4707 | fabF | DM40_4707 | DM40_1787 | Short chain dehydrogenase family protein. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.673 |
DM40_4707 | fabH | DM40_4707 | DM40_1783 | Short chain dehydrogenase family protein. | 3-oxoacyl-[acyl-carrier-] synthase III family protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.568 |
DM40_4707 | fabZ | DM40_4707 | DM40_2645 | Short chain dehydrogenase family protein. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.540 |
DM40_4707 | mdcH | DM40_4707 | DM40_1929 | Short chain dehydrogenase family protein. | malonate_mdcH: malonate decarboxylase, epsilon subunit. | 0.543 |
DM40_4707 | ptsP | DM40_4707 | DM40_424 | Short chain dehydrogenase family protein. | PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family. | 0.580 |
DM40_4707 | uca | DM40_4707 | DM40_5322 | Short chain dehydrogenase family protein. | Urea_carbox: urea carboxylase. | 0.557 |
DM40_4708 | DM40_4707 | DM40_4708 | DM40_4707 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Short chain dehydrogenase family protein. | 0.540 |
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