Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_472ahpC/TSA family protein. (178 aa)    
Predicted Functional Partners:
ccsB
cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB.
 
  
 0.807
DM40_1096
Cytochrome C biogenesis transmembrane region family protein.
  
 
 0.800
DM40_438
Redoxin family protein.
 
 
 0.789
DM40_1821
Redoxin family protein.
 
 
 0.769
coxB-2
coxB: cytochrome c oxidase, subunit II.
 
 
 0.742
coxB-3
coxB: cytochrome c oxidase, subunit II.
 
 
 0.735
coxB
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 
 0.727
DM40_1100
resB-like family protein.
 
  
 0.715
DM40_3304
Thioredoxin family protein.
  
 
 0.689
tsaA
Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein.
  
 0.668
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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