STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
echA15enoyl-CoA hydratase EchA15; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)    
Predicted Functional Partners:
DM40_2800
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
  
  0.969
DM40_1480
glutaryl-CoA dehydrogenase.
   
  0.964
DM40_3096
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
   
  0.964
DM40_4542
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein.
 
 0.961
DM40_2506
enoyl-CoA hydratase/isomerase family protein.
 
0.960
DM40_481
enoyl-CoA hydratase/isomerase family protein.
 
0.960
DM40_3093
D-ala D-ala ligase family protein.
  
 0.956
DM40_337
enoyl-CoA hydratase/isomerase family protein.
  
 0.956
DM40_3095
Carboxyl transferase domain protein.
  
 
 0.955
fabV
NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.
     
 0.945
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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