Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM40_1627 | DM40_4381 | ftsK/SpoIIIE family protein. | VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.490 |
DM40_1627 | DM40_4568 | ftsK/SpoIIIE family protein. | Subtilase family protein. | 0.490 |
DM40_1627 | DM40_514 | ftsK/SpoIIIE family protein. | Hypothetical protein. | 0.858 |
DM40_1668 | DM40_514 | tonB dependent receptor family protein. | Hypothetical protein. | 0.870 |
DM40_2978 | DM40_4381 | ftsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family. | VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.490 |
DM40_2978 | DM40_4568 | ftsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family. | Subtilase family protein. | 0.490 |
DM40_2978 | DM40_514 | ftsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family. | Hypothetical protein. | 0.858 |
DM40_3230 | DM40_514 | tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. | Hypothetical protein. | 0.872 |
DM40_3702 | DM40_3957 | Putative transmembrane protein. | Putative transmembrane protein. | 0.730 |
DM40_3702 | DM40_514 | Putative transmembrane protein. | Hypothetical protein. | 0.828 |
DM40_3702 | DM40_515 | Putative transmembrane protein. | Hypothetical protein. | 0.549 |
DM40_3957 | DM40_3702 | Putative transmembrane protein. | Putative transmembrane protein. | 0.730 |
DM40_3957 | DM40_514 | Putative transmembrane protein. | Hypothetical protein. | 0.943 |
DM40_4381 | DM40_1627 | VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | ftsK/SpoIIIE family protein. | 0.490 |
DM40_4381 | DM40_2978 | VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | ftsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family. | 0.490 |
DM40_4381 | DM40_514 | VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Hypothetical protein. | 0.840 |
DM40_4568 | DM40_1627 | Subtilase family protein. | ftsK/SpoIIIE family protein. | 0.490 |
DM40_4568 | DM40_2978 | Subtilase family protein. | ftsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family. | 0.490 |
DM40_4568 | DM40_514 | Subtilase family protein. | Hypothetical protein. | 0.840 |
DM40_460 | DM40_514 | Hypothetical protein; Prc: C-terminal processing peptidase family protein; Belongs to the peptidase S41A family. | Hypothetical protein. | 0.849 |
page 1 of 2