Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sdhA-2sdhA_forward: succinate dehydrogenase, flavoprotein subunit. (591 aa)    
Predicted Functional Partners:
DM40_5363
dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein.
 
 0.997
sdhC-2
succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit.
 
 0.994
sdhB
dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.992
sdhB-2
dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.992
sdhD-2
Succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein.
 
 
 0.990
sdhC
succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit.
 
 0.978
sdhD
Succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein.
 
 
 0.958
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.954
DM40_2839
Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.945
DM40_1160
Cytochrome C1 family protein.
   
 
 0.923
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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