STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCcutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (241 aa)    
Predicted Functional Partners:
nagE
PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component.
 
   
 0.778
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.570
DM40_538
EAL domain protein.
       0.563
DM40_2979
Lactonase, 7-bladed beta-propeller family protein.
 
    0.525
DM40_3278
ATPase-IB1_Cu: copper-translocating P-type ATPase.
     
 0.521
chb
Chitobiase.
 
     0.516
nagA
nagA: N-acetylglucosamine-6-phosphate deacetylase.
 
     0.497
DM40_2825
Lactonase, 7-bladed beta-propeller family protein.
 
    0.478
DM40_2180
Oxidoreductase, NAD-binding Rossmann fold family protein.
 
     0.445
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
     
 0.443
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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