STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_5612Flavin reductase like domain protein. (171 aa)    
Predicted Functional Partners:
bluB
bluB: 5,6-dimethylbenzimidazole synthase.
  
 
 0.916
hpaD
hpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase.
  
 
  0.904
ribF
ribF: riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.903
msuE
FMN_reduc_MsuE: FMN reductase.
    
 0.903
ubiX
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
  0.900
ribE
ribE: riboflavin synthase, alpha subunit.
    
  0.900
DM40_3078
NADPH-dependent FMN reductase family protein.
    
  0.900
DM40_3653
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein.
     
  0.900
ribE-2
ribE: riboflavin synthase, alpha subunit.
    
  0.900
feaB
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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