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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfnGLLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG. (367 aa)    
Predicted Functional Partners:
msuE
FMN_reduc_MsuE: FMN reductase.
 
 0.967
DM40_3078
NADPH-dependent FMN reductase family protein.
  
  0.823
DM40_4457
Luciferase-like monooxygenase family protein.
  
  
 
0.811
ssuD
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
  
 
0.809
DM40_4279
Luciferase-like monooxygenase family protein.
  
  
 
0.809
DM40_4095
NMT1-like family protein.
 
 
  0.770
DM40_3171
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
  
     0.765
DM40_4609
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
     0.765
DM40_4608
sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family.
  
     0.764
DM40_4078
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
 
 
  0.754
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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