Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_1824 | DM40_3431 | DM40_1824 | DM40_3431 | ABC transporter family protein. | Siderophore-interacting FAD-binding domain protein. | 0.432 |
DM40_1824 | DM40_641 | DM40_1824 | DM40_641 | ABC transporter family protein. | ABC transporter family protein. | 0.889 |
DM40_1824 | msbA | DM40_1824 | DM40_2959 | ABC transporter family protein. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.415 |
DM40_3431 | DM40_1824 | DM40_3431 | DM40_1824 | Siderophore-interacting FAD-binding domain protein. | ABC transporter family protein. | 0.432 |
DM40_3431 | DM40_3801 | DM40_3431 | DM40_3801 | Siderophore-interacting FAD-binding domain protein. | ABC transporter family protein. | 0.432 |
DM40_3431 | DM40_5633 | DM40_3431 | DM40_5633 | Siderophore-interacting FAD-binding domain protein. | ABC transporter family protein. | 0.432 |
DM40_3431 | DM40_641 | DM40_3431 | DM40_641 | Siderophore-interacting FAD-binding domain protein. | ABC transporter family protein. | 0.972 |
DM40_3431 | msbA | DM40_3431 | DM40_2959 | Siderophore-interacting FAD-binding domain protein. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.432 |
DM40_3801 | DM40_3431 | DM40_3801 | DM40_3431 | ABC transporter family protein. | Siderophore-interacting FAD-binding domain protein. | 0.432 |
DM40_3801 | DM40_641 | DM40_3801 | DM40_641 | ABC transporter family protein. | ABC transporter family protein. | 0.884 |
DM40_5068 | DM40_641 | DM40_5068 | DM40_641 | type_I_hlyD: type I secretion membrane fusion, HlyD family protein. | ABC transporter family protein. | 0.922 |
DM40_5068 | DM40_642 | DM40_5068 | DM40_642 | type_I_hlyD: type I secretion membrane fusion, HlyD family protein. | Outer membrane efflux family protein. | 0.729 |
DM40_5068 | DM40_814 | DM40_5068 | DM40_814 | type_I_hlyD: type I secretion membrane fusion, HlyD family protein. | type_I_sec_TolC: type I secretion outer membrane, TolC family protein. | 0.761 |
DM40_5633 | DM40_3431 | DM40_5633 | DM40_3431 | ABC transporter family protein. | Siderophore-interacting FAD-binding domain protein. | 0.432 |
DM40_5633 | DM40_641 | DM40_5633 | DM40_641 | ABC transporter family protein. | ABC transporter family protein. | 0.883 |
DM40_639 | DM40_641 | DM40_639 | DM40_641 | Biotin-lipoyl like family protein. | ABC transporter family protein. | 0.980 |
DM40_639 | DM40_642 | DM40_639 | DM40_642 | Biotin-lipoyl like family protein. | Outer membrane efflux family protein. | 0.755 |
DM40_639 | DM40_814 | DM40_639 | DM40_814 | Biotin-lipoyl like family protein. | type_I_sec_TolC: type I secretion outer membrane, TolC family protein. | 0.735 |
DM40_641 | DM40_1824 | DM40_641 | DM40_1824 | ABC transporter family protein. | ABC transporter family protein. | 0.889 |
DM40_641 | DM40_3431 | DM40_641 | DM40_3431 | ABC transporter family protein. | Siderophore-interacting FAD-binding domain protein. | 0.972 |
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