Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EXO1 | FANCI | ENSPANP00000004652 | ENSPANP00000014429 | Exonuclease 1. | FA complementation group I. | 0.620 |
EXO1 | FANCM | ENSPANP00000004652 | ENSPANP00000016793 | Exonuclease 1. | FA complementation group M. | 0.906 |
EXO1 | FEN1 | ENSPANP00000004652 | ENSPANP00000018167 | Exonuclease 1. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.931 |
EXO1 | HELQ | ENSPANP00000004652 | ENSPANP00000017366 | Exonuclease 1. | Helicase, POLQ like. | 0.692 |
EXO1 | MRE11 | ENSPANP00000004652 | ENSPANP00000009957 | Exonuclease 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.982 |
EXO1 | NEIL3 | ENSPANP00000004652 | ENSPANP00000006567 | Exonuclease 1. | Nei like DNA glycosylase 3. | 0.826 |
EXO1 | POLN | ENSPANP00000004652 | ENSPANP00000001450 | Exonuclease 1. | DNA polymerase nu. | 0.693 |
EXO1 | RAD50 | ENSPANP00000004652 | ENSPANP00000003519 | Exonuclease 1. | Zinc-hook domain-containing protein. | 0.924 |
EXO1 | RBBP8 | ENSPANP00000004652 | ENSPANP00000008711 | Exonuclease 1. | RB binding protein 8, endonuclease. | 0.924 |
FAN1 | FANCI | ENSPANP00000016210 | ENSPANP00000014429 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | FA complementation group I. | 0.797 |
FAN1 | FANCM | ENSPANP00000016210 | ENSPANP00000016793 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | FA complementation group M. | 0.982 |
FAN1 | HELQ | ENSPANP00000016210 | ENSPANP00000017366 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Helicase, POLQ like. | 0.591 |
FAN1 | POLN | ENSPANP00000016210 | ENSPANP00000001450 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | DNA polymerase nu. | 0.632 |
FANCI | EXO1 | ENSPANP00000014429 | ENSPANP00000004652 | FA complementation group I. | Exonuclease 1. | 0.620 |
FANCI | FAN1 | ENSPANP00000014429 | ENSPANP00000016210 | FA complementation group I. | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.797 |
FANCI | FANCM | ENSPANP00000014429 | ENSPANP00000016793 | FA complementation group I. | FA complementation group M. | 0.984 |
FANCI | HELQ | ENSPANP00000014429 | ENSPANP00000017366 | FA complementation group I. | Helicase, POLQ like. | 0.598 |
FANCI | NEIL3 | ENSPANP00000014429 | ENSPANP00000006567 | FA complementation group I. | Nei like DNA glycosylase 3. | 0.531 |
FANCI | POLN | ENSPANP00000014429 | ENSPANP00000001450 | FA complementation group I. | DNA polymerase nu. | 0.637 |
FANCM | EXO1 | ENSPANP00000016793 | ENSPANP00000004652 | FA complementation group M. | Exonuclease 1. | 0.906 |
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