Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX23 | EFTUD2 | ENSPANP00000002455 | ENSPANP00000020816 | DEAD-box helicase 23. | Elongation factor Tu GTP binding domain containing 2. | 0.975 |
DDX23 | PRPF3 | ENSPANP00000002455 | ENSPANP00000030934 | DEAD-box helicase 23. | Pre-mRNA processing factor 3. | 0.955 |
DDX23 | PRPF31 | ENSPANP00000002455 | ENSPANP00000009720 | DEAD-box helicase 23. | Nop domain-containing protein. | 0.939 |
DDX23 | PRPF6 | ENSPANP00000002455 | ENSPANP00000014391 | DEAD-box helicase 23. | Pre-mRNA processing factor 6. | 0.981 |
DDX23 | PRPF8 | ENSPANP00000002455 | ENSPANP00000019479 | DEAD-box helicase 23. | Pre-mRNA processing factor 8. | 0.978 |
DDX23 | SART1 | ENSPANP00000002455 | ENSPANP00000027166 | DEAD-box helicase 23. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.949 |
DDX23 | SNRNP200 | ENSPANP00000002455 | ENSPANP00000010937 | DEAD-box helicase 23. | Small nuclear ribonucleoprotein U5 subunit 200. | 0.972 |
DDX23 | SNRNP40 | ENSPANP00000002455 | ENSPANP00000004526 | DEAD-box helicase 23. | Small nuclear ribonucleoprotein U5 subunit 40. | 0.942 |
DDX23 | SNRPD2 | ENSPANP00000002455 | ENSPANP00000006048 | DEAD-box helicase 23. | Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. | 0.941 |
DDX23 | TXNL4A | ENSPANP00000002455 | ENSPANP00000006712 | DEAD-box helicase 23. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.939 |
EFTUD2 | DDX23 | ENSPANP00000020816 | ENSPANP00000002455 | Elongation factor Tu GTP binding domain containing 2. | DEAD-box helicase 23. | 0.975 |
EFTUD2 | PRPF3 | ENSPANP00000020816 | ENSPANP00000030934 | Elongation factor Tu GTP binding domain containing 2. | Pre-mRNA processing factor 3. | 0.985 |
EFTUD2 | PRPF31 | ENSPANP00000020816 | ENSPANP00000009720 | Elongation factor Tu GTP binding domain containing 2. | Nop domain-containing protein. | 0.987 |
EFTUD2 | PRPF6 | ENSPANP00000020816 | ENSPANP00000014391 | Elongation factor Tu GTP binding domain containing 2. | Pre-mRNA processing factor 6. | 0.998 |
EFTUD2 | PRPF8 | ENSPANP00000020816 | ENSPANP00000019479 | Elongation factor Tu GTP binding domain containing 2. | Pre-mRNA processing factor 8. | 0.999 |
EFTUD2 | SART1 | ENSPANP00000020816 | ENSPANP00000027166 | Elongation factor Tu GTP binding domain containing 2. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.988 |
EFTUD2 | SNRNP200 | ENSPANP00000020816 | ENSPANP00000010937 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein U5 subunit 200. | 0.999 |
EFTUD2 | SNRNP40 | ENSPANP00000020816 | ENSPANP00000004526 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein U5 subunit 40. | 0.973 |
EFTUD2 | SNRPD2 | ENSPANP00000020816 | ENSPANP00000006048 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. | 0.969 |
EFTUD2 | TXNL4A | ENSPANP00000020816 | ENSPANP00000006712 | Elongation factor Tu GTP binding domain containing 2. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.992 |
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