Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATL1 | REEP1 | ENSPANP00000023134 | ENSPANP00000036024 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.600 |
ATL1 | REEP2 | ENSPANP00000023134 | ENSPANP00000005547 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.600 |
ATL1 | RTN2 | ENSPANP00000023134 | ENSPANP00000015276 | Atlastin GTPase 1. | Reticulon. | 0.607 |
ATL1 | SPART | ENSPANP00000023134 | ENSPANP00000007977 | Atlastin GTPase 1. | Spartin. | 0.572 |
ATL1 | SPAST | ENSPANP00000023134 | ENSPANP00000011659 | Atlastin GTPase 1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.606 |
ATL2 | REEP1 | ENSPANP00000036481 | ENSPANP00000036024 | Atlastin GTPase 2. | Receptor expression-enhancing protein. | 0.516 |
ATL2 | REEP2 | ENSPANP00000036481 | ENSPANP00000005547 | Atlastin GTPase 2. | Receptor expression-enhancing protein. | 0.590 |
ATL2 | RTN2 | ENSPANP00000036481 | ENSPANP00000015276 | Atlastin GTPase 2. | Reticulon. | 0.607 |
ATL2 | SPART | ENSPANP00000036481 | ENSPANP00000007977 | Atlastin GTPase 2. | Spartin. | 0.567 |
ATL2 | SPAST | ENSPANP00000036481 | ENSPANP00000011659 | Atlastin GTPase 2. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.594 |
ATL3 | REEP1 | ENSPANP00000043868 | ENSPANP00000036024 | Atlastin GTPase 3. | Receptor expression-enhancing protein. | 0.516 |
ATL3 | REEP2 | ENSPANP00000043868 | ENSPANP00000005547 | Atlastin GTPase 3. | Receptor expression-enhancing protein. | 0.584 |
ATL3 | RTN2 | ENSPANP00000043868 | ENSPANP00000015276 | Atlastin GTPase 3. | Reticulon. | 0.607 |
ATL3 | SPART | ENSPANP00000043868 | ENSPANP00000007977 | Atlastin GTPase 3. | Spartin. | 0.562 |
ATL3 | SPAST | ENSPANP00000043868 | ENSPANP00000011659 | Atlastin GTPase 3. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.589 |
FARS2 | IBA57 | ENSPANP00000013559 | ENSPANP00000001481 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Iron-sulfur cluster assembly factor IBA57. | 0.580 |
FARS2 | REEP2 | ENSPANP00000013559 | ENSPANP00000005547 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Receptor expression-enhancing protein. | 0.655 |
FARS2 | ZFYVE27 | ENSPANP00000013559 | ENSPANP00000027717 | Phenylalanyl-tRNA synthetase 2, mitochondrial. | Zinc finger FYVE-type containing 27. | 0.580 |
IBA57 | FARS2 | ENSPANP00000001481 | ENSPANP00000013559 | Iron-sulfur cluster assembly factor IBA57. | Phenylalanyl-tRNA synthetase 2, mitochondrial. | 0.580 |
IBA57 | REEP2 | ENSPANP00000001481 | ENSPANP00000005547 | Iron-sulfur cluster assembly factor IBA57. | Receptor expression-enhancing protein. | 0.616 |
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