STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF7Ring finger protein 7. (113 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.999
UBXN7
UBX domain protein 7.
    
 0.987
ELOB
Elongin B.
   
 0.985
ELOC
Elongin C; Belongs to the SKP1 family.
   
 0.985
ENSPANP00000047626
Ubiquitin-like domain-containing protein.
   
 0.978
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.959
DDB1
Damage specific DNA binding protein 1.
    
 0.939
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.931
SKP1
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.920
LOC101001699
S-phase kinase-associated protein 1.
   
 0.920
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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