STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4Reticulon. (1194 aa)    
Predicted Functional Partners:
RTN3
Reticulon.
    
0.974
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
   
 0.952
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
   
 0.926
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.769
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.768
MAG
Myelin associated glycoprotein.
   
 
 0.764
NGFR
Nerve growth factor receptor.
     
 0.764
MAPRE1
Microtubule associated protein RP/EB family member 1.
      
 0.692
VTA1
Vesicle trafficking 1.
    
   0.642
GCH1
GTP cyclohydrolase 1.
    
   0.642
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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