Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BACE1 | BACE2 | ENSPANP00000035661 | ENSPANP00000012937 | Beta-secretase 1; Belongs to the peptidase A1 family. | Beta-secretase 2; Belongs to the peptidase A1 family. | 0.897 |
BACE1 | RTN3 | ENSPANP00000035661 | ENSPANP00000023420 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.950 |
BACE1 | RTN4 | ENSPANP00000035661 | ENSPANP00000005851 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.952 |
BACE2 | BACE1 | ENSPANP00000012937 | ENSPANP00000035661 | Beta-secretase 2; Belongs to the peptidase A1 family. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.897 |
BACE2 | RTN3 | ENSPANP00000012937 | ENSPANP00000023420 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.929 |
BACE2 | RTN4 | ENSPANP00000012937 | ENSPANP00000005851 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.926 |
GCH1 | RTN3 | ENSPANP00000042879 | ENSPANP00000023420 | GTP cyclohydrolase 1. | Reticulon. | 0.642 |
GCH1 | RTN4 | ENSPANP00000042879 | ENSPANP00000005851 | GTP cyclohydrolase 1. | Reticulon. | 0.642 |
GCH1 | VTA1 | ENSPANP00000042879 | ENSPANP00000007836 | GTP cyclohydrolase 1. | Vesicle trafficking 1. | 0.916 |
LINGO1 | MAG | ENSPANP00000014309 | ENSPANP00000021121 | Leucine rich repeat and Ig domain containing 1. | Myelin associated glycoprotein. | 0.792 |
LINGO1 | NGFR | ENSPANP00000014309 | ENSPANP00000040193 | Leucine rich repeat and Ig domain containing 1. | Nerve growth factor receptor. | 0.859 |
LINGO1 | OMG | ENSPANP00000014309 | ENSPANP00000007255 | Leucine rich repeat and Ig domain containing 1. | Oligodendrocyte myelin glycoprotein. | 0.817 |
LINGO1 | RTN3 | ENSPANP00000014309 | ENSPANP00000023420 | Leucine rich repeat and Ig domain containing 1. | Reticulon. | 0.562 |
LINGO1 | RTN4 | ENSPANP00000014309 | ENSPANP00000005851 | Leucine rich repeat and Ig domain containing 1. | Reticulon. | 0.769 |
MAG | LINGO1 | ENSPANP00000021121 | ENSPANP00000014309 | Myelin associated glycoprotein. | Leucine rich repeat and Ig domain containing 1. | 0.792 |
MAG | NGFR | ENSPANP00000021121 | ENSPANP00000040193 | Myelin associated glycoprotein. | Nerve growth factor receptor. | 0.661 |
MAG | OMG | ENSPANP00000021121 | ENSPANP00000007255 | Myelin associated glycoprotein. | Oligodendrocyte myelin glycoprotein. | 0.944 |
MAG | RTN3 | ENSPANP00000021121 | ENSPANP00000023420 | Myelin associated glycoprotein. | Reticulon. | 0.435 |
MAG | RTN4 | ENSPANP00000021121 | ENSPANP00000005851 | Myelin associated glycoprotein. | Reticulon. | 0.764 |
MAPRE1 | RTN4 | ENSPANP00000016849 | ENSPANP00000005851 | Microtubule associated protein RP/EB family member 1. | Reticulon. | 0.692 |
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