Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BNC1 | UPK3B | ENSPANP00000047207 | ENSPANP00000007323 | Basonuclin 1. | Uroplakin 3B. | 0.470 |
LRRN4 | UPK3B | ENSPANP00000017037 | ENSPANP00000007323 | Leucine rich repeat neuronal 4. | Uroplakin 3B. | 0.612 |
RBP5 | UPK1A | ENSPANP00000005496 | ENSPANP00000038877 | Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Tetraspanin. | 0.412 |
RBP5 | UPK2 | ENSPANP00000005496 | ENSPANP00000001693 | Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Uroplakin 2. | 0.489 |
RBP5 | UPK3B | ENSPANP00000005496 | ENSPANP00000007323 | Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Uroplakin 3B. | 0.477 |
UPK1A | RBP5 | ENSPANP00000038877 | ENSPANP00000005496 | Tetraspanin. | Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.412 |
UPK1A | UPK1B | ENSPANP00000038877 | ENSPANP00000002496 | Tetraspanin. | Tetraspanin. | 0.525 |
UPK1A | UPK2 | ENSPANP00000038877 | ENSPANP00000001693 | Tetraspanin. | Uroplakin 2. | 0.701 |
UPK1A | UPK3B | ENSPANP00000038877 | ENSPANP00000007323 | Tetraspanin. | Uroplakin 3B. | 0.520 |
UPK1B | UPK1A | ENSPANP00000002496 | ENSPANP00000038877 | Tetraspanin. | Tetraspanin. | 0.525 |
UPK1B | UPK2 | ENSPANP00000002496 | ENSPANP00000001693 | Tetraspanin. | Uroplakin 2. | 0.634 |
UPK1B | UPK3B | ENSPANP00000002496 | ENSPANP00000007323 | Tetraspanin. | Uroplakin 3B. | 0.734 |
UPK2 | RBP5 | ENSPANP00000001693 | ENSPANP00000005496 | Uroplakin 2. | Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.489 |
UPK2 | UPK1A | ENSPANP00000001693 | ENSPANP00000038877 | Uroplakin 2. | Tetraspanin. | 0.701 |
UPK2 | UPK1B | ENSPANP00000001693 | ENSPANP00000002496 | Uroplakin 2. | Tetraspanin. | 0.634 |
UPK2 | UPK3B | ENSPANP00000001693 | ENSPANP00000007323 | Uroplakin 2. | Uroplakin 3B. | 0.491 |
UPK3B | BNC1 | ENSPANP00000007323 | ENSPANP00000047207 | Uroplakin 3B. | Basonuclin 1. | 0.470 |
UPK3B | LRRN4 | ENSPANP00000007323 | ENSPANP00000017037 | Uroplakin 3B. | Leucine rich repeat neuronal 4. | 0.612 |
UPK3B | RBP5 | ENSPANP00000007323 | ENSPANP00000005496 | Uroplakin 3B. | Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.477 |
UPK3B | UPK1A | ENSPANP00000007323 | ENSPANP00000038877 | Uroplakin 3B. | Tetraspanin. | 0.520 |
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