Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDNF | NRTN | ENSPANP00000019903 | ENSPANP00000009097 | Cerebral dopamine neurotrophic factor. | Neurturin. | 0.664 |
CDNF | PSPN | ENSPANP00000019903 | ENSPANP00000034545 | Cerebral dopamine neurotrophic factor. | Persephin. | 0.489 |
CDNF | TH | ENSPANP00000019903 | ENSPANP00000025071 | Cerebral dopamine neurotrophic factor. | Tyrosine hydroxylase. | 0.562 |
GDNF | GFRA1 | ENSPANP00000000944 | ENSPANP00000016452 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | 0.980 |
GDNF | GFRA2 | ENSPANP00000000944 | ENSPANP00000014835 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | 0.931 |
GDNF | GFRA3 | ENSPANP00000000944 | ENSPANP00000003549 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 3. | 0.912 |
GDNF | GFRA4 | ENSPANP00000000944 | ENSPANP00000031226 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 4. | 0.695 |
GDNF | GFRAL | ENSPANP00000000944 | ENSPANP00000013072 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha like. | 0.924 |
GDNF | NRTN | ENSPANP00000000944 | ENSPANP00000009097 | Glial cell derived neurotrophic factor. | Neurturin. | 0.682 |
GDNF | PSPN | ENSPANP00000000944 | ENSPANP00000034545 | Glial cell derived neurotrophic factor. | Persephin. | 0.657 |
GDNF | RET | ENSPANP00000000944 | ENSPANP00000020151 | Glial cell derived neurotrophic factor. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.849 |
GDNF | TH | ENSPANP00000000944 | ENSPANP00000025071 | Glial cell derived neurotrophic factor. | Tyrosine hydroxylase. | 0.535 |
GFRA1 | GDNF | ENSPANP00000016452 | ENSPANP00000000944 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Glial cell derived neurotrophic factor. | 0.980 |
GFRA1 | NRTN | ENSPANP00000016452 | ENSPANP00000009097 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Neurturin. | 0.851 |
GFRA1 | PSPN | ENSPANP00000016452 | ENSPANP00000034545 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Persephin. | 0.692 |
GFRA1 | RET | ENSPANP00000016452 | ENSPANP00000020151 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.990 |
GFRA2 | GDNF | ENSPANP00000014835 | ENSPANP00000000944 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Glial cell derived neurotrophic factor. | 0.931 |
GFRA2 | NRTN | ENSPANP00000014835 | ENSPANP00000009097 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Neurturin. | 0.971 |
GFRA2 | PSPN | ENSPANP00000014835 | ENSPANP00000034545 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Persephin. | 0.746 |
GFRA2 | RET | ENSPANP00000014835 | ENSPANP00000020151 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.987 |
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