STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1Oligophrenin 1. (802 aa)    
Predicted Functional Partners:
TMEM132E
Transmembrane protein 132E.
      
 0.580
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.580
ARHGEF5
Rho guanine nucleotide exchange factor 5.
    
 
 0.572
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
     
 0.568
FAM155B
Family with sequence similarity 155 member B.
      
 0.567
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
      
 0.564
ZC4H2
Zinc finger C4H2-type containing.
      
 0.564
CNTN3
Contactin 3.
      
 0.562
OLFML2A
Olfactomedin like 2A.
      
 0.562
LAS1L
LAS1 like, ribosome biogenesis factor.
      
 0.561
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.