Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EMD | LMNA | ENSPANP00000003709 | ENSPANP00000002138 | LEM domain-containing protein. | Lamin A/C; Belongs to the intermediate filament family. | 0.981 |
EMD | LMNB1 | ENSPANP00000003709 | ENSPANP00000002609 | LEM domain-containing protein. | Lamin B1; Belongs to the intermediate filament family. | 0.902 |
EMD | SUN1 | ENSPANP00000003709 | ENSPANP00000008202 | LEM domain-containing protein. | Sad1 and UNC84 domain containing 1. | 0.904 |
EMD | SUN2 | ENSPANP00000003709 | ENSPANP00000013343 | LEM domain-containing protein. | Sad1 and UNC84 domain containing 2. | 0.807 |
EMD | SUN3 | ENSPANP00000003709 | ENSPANP00000007623 | LEM domain-containing protein. | Sad1 and UNC84 domain containing 3. | 0.507 |
EMD | SYNE1 | ENSPANP00000003709 | ENSPANP00000033670 | LEM domain-containing protein. | Spectrin repeat containing nuclear envelope protein 1. | 0.632 |
EMD | SYNE2 | ENSPANP00000003709 | ENSPANP00000036286 | LEM domain-containing protein. | Spectrin repeat containing nuclear envelope protein 2. | 0.622 |
FHOD1 | SUN1 | ENSPANP00000033586 | ENSPANP00000008202 | Formin homology 2 domain containing 1. | Sad1 and UNC84 domain containing 1. | 0.435 |
FHOD1 | SYNE1 | ENSPANP00000033586 | ENSPANP00000033670 | Formin homology 2 domain containing 1. | Spectrin repeat containing nuclear envelope protein 1. | 0.876 |
FHOD1 | SYNE2 | ENSPANP00000033586 | ENSPANP00000036286 | Formin homology 2 domain containing 1. | Spectrin repeat containing nuclear envelope protein 2. | 0.912 |
FHOD3 | SYNE1 | ENSPANP00000008190 | ENSPANP00000033670 | Formin homology 2 domain containing 3. | Spectrin repeat containing nuclear envelope protein 1. | 0.704 |
FHOD3 | SYNE2 | ENSPANP00000008190 | ENSPANP00000036286 | Formin homology 2 domain containing 3. | Spectrin repeat containing nuclear envelope protein 2. | 0.744 |
LMNA | EMD | ENSPANP00000002138 | ENSPANP00000003709 | Lamin A/C; Belongs to the intermediate filament family. | LEM domain-containing protein. | 0.981 |
LMNA | LMNB1 | ENSPANP00000002138 | ENSPANP00000002609 | Lamin A/C; Belongs to the intermediate filament family. | Lamin B1; Belongs to the intermediate filament family. | 0.987 |
LMNA | SUN1 | ENSPANP00000002138 | ENSPANP00000008202 | Lamin A/C; Belongs to the intermediate filament family. | Sad1 and UNC84 domain containing 1. | 0.819 |
LMNA | SUN2 | ENSPANP00000002138 | ENSPANP00000013343 | Lamin A/C; Belongs to the intermediate filament family. | Sad1 and UNC84 domain containing 2. | 0.925 |
LMNA | SYNE1 | ENSPANP00000002138 | ENSPANP00000033670 | Lamin A/C; Belongs to the intermediate filament family. | Spectrin repeat containing nuclear envelope protein 1. | 0.801 |
LMNA | SYNE2 | ENSPANP00000002138 | ENSPANP00000036286 | Lamin A/C; Belongs to the intermediate filament family. | Spectrin repeat containing nuclear envelope protein 2. | 0.788 |
LMNB1 | EMD | ENSPANP00000002609 | ENSPANP00000003709 | Lamin B1; Belongs to the intermediate filament family. | LEM domain-containing protein. | 0.902 |
LMNB1 | LMNA | ENSPANP00000002609 | ENSPANP00000002138 | Lamin B1; Belongs to the intermediate filament family. | Lamin A/C; Belongs to the intermediate filament family. | 0.987 |
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